Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857144.1_cds_XP_016513361.1_25906
CDS Infomation

[gene=LOC107830348] [db_xref=GeneID:107830348] [protein=heparanase-like protein 1 isoform X2] [protein_id=XP_016513361.1] [location=complement(join(25659..26048,27324..27423,27555..27680,27770..27959,28686..28919,29127..29176,30049..30232,30452..30488,30612..30821))] [gbkey=CDS]
Sequence

ATGGGCTTCCCACCCTTCTTGTTAATCTTTCTGGCAGTATGTCCTGCATTTTTGGCACAA
ATAGTTGAAGATACAGCACTTTTGATTGATGCAACTGTAAAAATTGCTGAGACTGATGCT
AATTATGTATGCGCTACCCTTGACTGGTGGCCTAAAGAAAAGTGTGACTACAACGACTGC
CCTTGGGGCTACACGTCTCTGATGAATCTGGATTTGTCTCACCCCTTTCTGGCAAATTCT
ATTCAAGCTTTCAACCCTTTGAGACTACGACTTGGAGGTTCTTTGCAAAACCGAGTAATA
TATGATGTAGGCAATTTGGAGTCTCGTTGCCATGCATTTACCAAGCAGGAGGATGGGTTG
TTTGGATTTTCAAAGGGATGCTTACATATGAATAGATGGGATGAGCTAAATAGCTTTTTC
AAGAAGACAGGAGCACTTGTGACCTTTGGCCTGAATGCATTGCATGGAAGGCAGCGGGCA
GGAAATGAGTTAAGTGGTAAGGGTATTGGTGCAAATGTTGATGCGGAGCAATACGGAAAA
GATGTTATCCATCTTAACAATCTCATAGACCAATTGTATAAGAATTTCCAACCCCGACCA
CTTCTCTTAGCACCAGGAGGATTCTATGATAAAGAGTGGTATGAGAAGCTTCTTGAGGTG
TCAGGGCCAGGCACTGTCGATGCCTTGACTCATCATATATATAATCTTGGTCCAGGATCG
GACCACAATCTCGTCAACAAAATTTTAAATCCTCTGCACTTAAATAAAATTGCTAACACA
TTCAGTAACCTTAGCCAAACCATTGAAATGAATGGTCCTTGGACTTCAGCTTGGGTTGGA
GAATCTGGTGGGGCCTTCAACAATGGAGGTCATAACGTGTCTAACACATTTGTGAACAGT
TTTTGGTACTTGGATCAGCTTGGGATGGCAGCCAAGTACCACACTAAAGTATATTGCAGG
CAGACTTTTATTGGAGGAAACTATGGGCTCCTTGACACAAGCACATTTATCCCAAATCCT
GATTATTACAGTGCACTTCTTTGGCATCGGCTAATGGGAAAAGGAGTTTTTGCTGTTAGC
AGCAATTCATCATCATATCTGCGCTCTTATGCCCACTGTACAAGAAATAGAGCAGGTGTG
ACATTACTTTTGATCAATTTAAGCAACCAAACTCAGTACAGAGTCAGCATCGAATCTAGT
GTACACACCTCCTCGCATGCCAACGAGAAATCAAATCACAAGAAGTCGTTTATACACGGT
CTTAAGAAAACTTTTTCATGGGTTGGAAGTAAATCATCAGACGTTACATTGTCACGCGAA
GAATACCATCTGACTCCACTAAATGGCAACCTTCACAGCAAAACTATGCTCCTGAATGGA
TTACCATTACAGCTCACAGAAATTGGAGACATCCCAAGTTTGTCTCCGGTCCTTGTAAAC
ATAGTGTCTCCAATATCAGTTGCCCCCTTGTCCATCAAATTCATTGTCTTTCCCAACTAT
AATTCTCCAGGTTGTAGATAG

Peptide Sequence

PEP ID

XP_016513361.1
PEP Infomation

PREDICTED: heparanase-like protein 1 isoform X2 [Nicotiana tabacum]
Sequence

MGFPPFLLIFLAVCPAFLAQIVEDTALLIDATVKIAETDANYVCATLDWWPKEKCDYNDC
PWGYTSLMNLDLSHPFLANSIQAFNPLRLRLGGSLQNRVIYDVGNLESRCHAFTKQEDGL
FGFSKGCLHMNRWDELNSFFKKTGALVTFGLNALHGRQRAGNELSGKGIGANVDAEQYGK
DVIHLNNLIDQLYKNFQPRPLLLAPGGFYDKEWYEKLLEVSGPGTVDALTHHIYNLGPGS
DHNLVNKILNPLHLNKIANTFSNLSQTIEMNGPWTSAWVGESGGAFNNGGHNVSNTFVNS
FWYLDQLGMAAKYHTKVYCRQTFIGGNYGLLDTSTFIPNPDYYSALLWHRLMGKGVFAVS
SNSSSYLRSYAHCTRNRAGVTLLLINLSNQTQYRVSIESSVHTSSHANEKSNHKKSFIHG
LKKTFSWVGSKSSDVTLSREEYHLTPLNGNLHSKTMLLNGLPLQLTEIGDIPSLSPVLVN
IVSPISVAPLSIKFIVFPNYNSPGCR

Transcript Sequence

Gene sequence data has not been registered.